|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR09G10800.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
bHLH |
Protein Properties |
Length: 411aa MW: 42612.7 Da PI: 9.6734 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G10800.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39 | 1.5e-12 | 341 | 386 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L+el+P+ k + +++L +Av+YIk+Lq
LPERR09G10800.1 341 SIAERVRRTRISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 386
689*********************6....4679****************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MYGSPVSKDL NQLPSGVNAG VRTPPQMSSP GLLRYRSAPS TLIGEVCGDF LQAATGGGGG 60 GGGVGQQLQL QRPASPPDHA AAAAADTVLA RFLSGHGHGE IRDKPPRPAV AAHFVPEDSA 120 AAMASHQQQQ QQLMYQSHQQ MASAMEGLYR TVSSGGGGAE SAAAAVAGNS LLRQSSSPAG 180 FLNHLTMDNG YGNMLRAGMA GAGVAGGDPR LKGQLSFSSR QGSVMSQISE MGSDELAGGS 240 SSPEAGSNGA GAGGYGGYQW EDPSPPASLH GGNNKRPRGG DDILPRQLSL PASSTKSGGK 300 PPSSAAAASP EMAAIEKFLQ FQDAVPCKIR AKRGCATHPR SIAERVRRTR ISERIRKLQE 360 LVPNMEKQTN TSDMLDLAVD YIKELQKQVK VLKDGRSNCT CSASKQKHFA G
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK120902 | 1e-140 | AK120902.1 Oryza sativa Japonica Group cDNA clone:J023030N23, full insert sequence. |