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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR09G10040.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 436aa MW: 46039.1 Da PI: 6.1516 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G10040.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.7 | 1.2e-09 | 265 | 313 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq
LPERR09G10040.2 265 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 313
58*************************9....556*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MDMNESSEKG MDSNASSGPG NGIPVEWQSQ FSGAFACQPS SAAQHHQQQH AMMDSFTAAA 60 SAGLWASSDV VAPPRAGAAG FLAPVPGFLQ QGLGHFPAVD TGFIERAARS TCYGGVAGGM 120 MGAGGAYGGA DHQSMGDAFG GATEGLMEHH RNDGSNDKAE QEFAGNGHDE MPSSELAGGD 180 CSSKGSDSKK RRRPNEVMGA DQVHSSNLPA DSANESVHSK DKGEESSPAT TTNGGKSKGK 240 GAKETSESQK EEYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV 300 MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLIRFPGVPS SSIGFSPEMM 360 HPQLQLSQPG LIQGGGAGMT NPDVFRRIIQ AQLGAKDGSQ MPHALNGSFS DVSQMAYPSL 420 GSQDLSIRPS QDGFQM
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK121418 | 0.0 | AK121418.1 Oryza sativa Japonica Group cDNA clone:J023133H05, full insert sequence. |