 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR09G09620.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
ZF-HD |
Protein Properties |
Length: 286aa MW: 30261.7 Da PI: 7.5338 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G09620.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 100 | 1.7e-31 | 69 | 123 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
rY+eClkNhA+ +GghavDGCgEfm++ ge+gt++al+CaAC+CHRnFHR+e+e+
LPERR09G09620.1 69 GRYRECLKNHAIGIGGHAVDGCGEFMAA-GEDGTIDALRCAACNCHRNFHRKESES 123
58*************************9.999********************9876 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MDFDDHDHDH DDGDDVMQPM PVSSSYETPP QHGGLGVGGG VMAPKPPGEI SNRVNKGPSC 60 VGAGAGAGGR YRECLKNHAI GIGGHAVDGC GEFMAAGEDG TIDALRCAAC NCHRNFHRKE 120 SESSLAAAVV PYGAATPHNQ FSPYYRTPAS YLHHHNQHHH MAAAAAAAAA AGGHPQRPLA 180 LPSTSHSGRD DGDDLSGMVG PMSAIGPLSG MSLGGAGPSS SGKKRFRTKF SQEQKDKMLA 240 FAERVGWRIQ KHDEAAVQQF CDEVGVKRHV LKVWMHNNKH TLGKKP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | CP012617 | 1e-167 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |