|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR09G07210.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
bHLH |
Protein Properties |
Length: 483aa MW: 47899.4 Da PI: 6.7696 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G07210.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.8 | 6.9e-12 | 265 | 310 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
LPERR09G07210.1 265 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 310
99***********************8.....6******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 483 aa
Download sequence Send
to blast |
MQPTTREMQA MAAAAAAGGA GQISLDDLRN GHAANAGGGG GVHDDFLDQM LSSLPPSAWP 60 DLAAAAAKAA EDDAAAEGMH HHHQQFGGPP TPYDESAMLA SRLRQHQISG GGGGGGGGGG 120 AAAVKQMVLQ QLADLRQGHH MMLHGMGRSP ASGGGGGGDG GGGLLLPLSL GSGGGGSGGD 180 VQALLKAATA NSAGGGDDGV YGGFAGSLQQ QQQHFQPHPQ TTAPTMPTQS FGGGGGAAQA 240 QAGGGAPAPP RQRVRARRGQ ATDPHSIAER LRRERIAERM KALQELVPNA NKTDKASMLD 300 EIIDYVKFLQ LQVLSMSRLG GAAAVAPLVA DMSSEGRGGG AANGGGAPAA AASDSLTVTE 360 QQVAKLMEED MGTAMQYLQG KGLCLMPISL ASAISSATCH LRPPVAAQHI PAGLAAAAAH 420 HQQLAMRGHH HLLPGLNPDG SVPPSPSMSV LTAQSAMANG GGGGGGDGEG GSQPKDAASV 480 SKP
|
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |