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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR09G06880.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 334aa MW: 35166 Da PI: 4.9767 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR09G06880.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 45.9 | 9.8e-15 | 101 | 147 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r+h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L +++e++k+L
LPERR09G06880.1 101 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVIEHVKEL 147
78*************************9.....8****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MWEGGGHEAA AAQLMPWFGT AASAFVADPA AAGFGFGFEA AVATAPVSRQ QRGGVAAAEE 60 EGLGGGGGKA VVSGLLGSLQ AELGRVTARE MMEAKALAAS RSHSEAERRR RQRINGHLAR 120 LRSLLPNTTK TDKASLLAEV IEHVKELKRQ TTAIAAAGNH HDDVDVDDED GMCRATSQQL 180 LPTEADELAV DAAVDGEGRL VVRASLCCED RPDLIPDIAR ALAALRLRAR RAEITTLGGR 240 VRSVLLITAD EHVGRGDDDV EEDDDDDEDE CTASHRRHEC IATVQEALRG VMDRRAAASS 300 DTSTSSGAAL AAGGGGSIKR QRMNYGGQDH QCSV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012617 | 1e-106 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |