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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR08G17860.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 396aa MW: 41790.4 Da PI: 6.3768 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR08G17860.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.2 | 3.5e-09 | 206 | 253 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq
LPERR08G17860.1 206 SHSLAERVRRERISQRMKVLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 253
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MDGGRAGGVG GGDYISSLLN SSPRLDFGLL SDGVVSGAGA GGGGDCLEKL CGDPGFAERA 60 ARLSSFNGYR YGGVGGDGGL FGMPPPAPAA AAAGAGGSRE ASSVSDPASA MKDAANGKKR 120 KATNAKGKGQ VGEERELSDG KRSKMNEIDK KENPVKPKAE QAGSDSSVED GGGAGQKQGK 180 GKNAKPVEPP KDYVHVRARR GQATDSHSLA ERVRRERISQ RMKVLQDLVP GCNKVIGKAL 240 MLDEIINYVQ SLQRQVEFLS MKLATVNPLD FSNLPTLLQK DMYQACGPSA SSVFSLESSN 300 SAFPFAEQGD VFQQFAPNSM ESQCTLNQLD LALSQATNGQ YAFQDGTTSA NLQQRNFWDD 360 DLQSVFHLEN GQSQDNGVSV PSFHGQLQAG HMKMEF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK072041 | 0.0 | AK072041.1 Oryza sativa Japonica Group cDNA clone:J013105J01, full insert sequence. |
GenBank | AK099291 | 0.0 | AK099291.1 Oryza sativa Japonica Group cDNA clone:J023127C06, full insert sequence. |