|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR08G15680.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
bHLH |
Protein Properties |
Length: 489aa MW: 53110.6 Da PI: 8.2363 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR08G15680.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 53.4 | 4.7e-17 | 211 | 259 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r +h++ E+rRR++iN++f+ LrellP++ ++K +Ka+ L +++eYI+ L
LPERR08G15680.1 211 RSKHSATEQRRRSKINDRFQLLRELLPHN----DQKRDKASFLLEVIEYIRFL 259
889*************************9....9*****************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 489 aa
Download sequence Send
to blast |
MGLQGNKATH DFLSLYAAAA TDYKQPAPAP PAQGFFLKTH DFLPQVEKRA DQPPPPPPSR 60 AQAADAATEK QLPHHQHAPP AATAAAAAFT ISHAATAVKQ EPPFAPWCQP VAAVDPRGYQ 120 WSLPFAARGV AVASRTQQQQ QQPPPPERKS GGGFMDAGSR SSGGAGFDDD DGLAARREVS 180 SSLKELTVRV EGKGGSCSGS AGTDQLPNTP RSKHSATEQR RRSKINDRFQ LLRELLPHND 240 QKRDKASFLL EVIEYIRFLR EKVQKYEVSY PEWNQENAKI VPWTNIYFRS SWKNAQNKSQ 300 TPADTSPDPP EHPKNGSSYV FPFTGNCDNN NAVETAAASG AHHQAETDPV SRTSYRSADT 360 PSPNNVADKV TSQRQAQLVR PSPAENCDML NNSDLAIDEG TISLSSQYSQ QLLNKLNHAL 420 ENSGLDLSQA SISVNLGKRA MKRSTPAATS TSKELTDPAC ESRAMGHQLR LGDGAEEHQA 480 SKRHKSDNT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK100183 | 0.0 | AK100183.1 Oryza sativa Japonica Group cDNA clone:J023030J22, full insert sequence. |