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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR08G15410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
Trihelix |
Protein Properties |
Length: 353aa MW: 39112.9 Da PI: 7.563 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR08G15410.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 61.7 | 1.8e-19 | 59 | 143 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W + e+++L++a++e+++rlrrg+lk+++We+v++ + + ++++ +qC++k+e+l+kry+ + ++ s +pyf+++e
LPERR08G15410.1 59 WAHMETMHLLDAYEERWTRLRRGQLKAQQWEDVAADVaarcaaSGAVLRKTGTQCRHKLEKLRKRYRIESARPVT------SLWPYFRRME 143
************************************99999744455689*****************99888775......68*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MAAAALQAAA AAADSERPGR METPAADRWA RRAEGEAAAA ADEEEPQLRR RKSAPGQPWA 60 HMETMHLLDA YEERWTRLRR GQLKAQQWED VAADVAARCA ASGAVLRKTG TQCRHKLEKL 120 RKRYRIESAR PVTSLWPYFR RMERLERGPL PVSSAFPSPP PPAVSPPAAA SDEDDDDDEE 180 EEDEEEAEEP IPRNNNTRSI NGILRESGSG GGFGGFAPRP PQPPPPQQQP SSIAMLSTAP 240 PRKRVAYEAF QAKAAMADKM KKEEEPPPAS IRPCGGANAE ISAILREFGQ GIMRLERRRM 300 EMQWEIDRGW KETEARHSRM LLDAQRRLVE SLNAVPPPAK KARREHGGSG DGS
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