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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR08G12910.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 321aa MW: 33865 Da PI: 6.0905 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR08G12910.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 45.1 | 1.8e-14 | 116 | 162 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r+h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L +++e++k+L
LPERR08G12910.1 116 RSHSEAERRRRQRINAHLARLRSLLPNT-----TKTDKASLLAEVIEHVKEL 162
78*************************9.....8****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MWEGGGVVDH GHESLLLQAA AAAHGAGGDA SSLAPWFGPS SAAPPPYMPA PFAAAAELQP 60 AAEEDPFGVV GNHYQQHQYG GGGMLGMEMQ MGGGGGLLGR MTAKEIMDAK ALAASRSHSE 120 AERRRRQRIN AHLARLRSLL PNTTKTDKAS LLAEVIEHVK ELKRQTSASS SPAQMQLMPT 180 EADELLVEAT ASAEDDQEEG RPSVVVARAS LCCEDRAELI PDMARALAAL RLRARRAHFA 240 TLGGRLRSVL LIAALDDEDE EDDGAVAASR RRHELVASIH EALRGVMDGK VPAASSDTSS 300 SGGGGSIKRQ RMVSAHEQGS F
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK109616 | 1e-91 | AK109616.1 Oryza sativa Japonica Group cDNA clone:002-137-H01, full insert sequence. |