 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR07G16630.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
YABBY |
| Protein Properties |
Length: 150aa MW: 16083.2 Da PI: 6.4872 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR07G16630.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 51.4 | 4.3e-16 | 12 | 56 | 7 | 50 |
YABBY 7 seqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtslls.vnl 50
e++ yvqC+fC t+l+vsvP +s+++vv+v+CG C+ +ls vnl
LPERR07G16630.1 12 RERLGYVQCSFCATVLLVSVPCSSVLRVVAVQCGRCSGILSaVNL 56
6899************************************93444 PP
|
| 2 | YABBY | 97.5 | 3.1e-30 | 87 | 150 | 103 | 166 |
YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166
+ d++vp + +++PP ++qr Psayn+f+keei+rik P+i+h++afs+aaknWah+P+i
LPERR07G16630.1 87 GDADDDVPPAAVANKPPGRKQRTPSAYNCFVKEEIKRIKGMEPNITHKQAFSTAAKNWAHLPRI 150
4677889988999*************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MSSVRDACSG VRERLGYVQC SFCATVLLVS VPCSSVLRVV AVQCGRCSGI LSAVNLPPPP 60
VVSASELDVD PPPREYSDES SEDSEGGDAD DDVPPAAVAN KPPGRKQRTP SAYNCFVKEE 120
IKRIKGMEPN ITHKQAFSTA AKNWAHLPRI
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB274019 | 1e-107 | AB274019.1 Oryza sativa Japonica Group OsYABBY7 mRNA for OsYABBY7 protein, complete cds. |
