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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR07G05350.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 261aa MW: 28009.9 Da PI: 7.1378 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR07G05350.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.6 | 1.6e-11 | 141 | 188 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka++L + ++YI+sLq
LPERR07G05350.1 141 SHSLAERARREKISERMTILQDLVPGC----NKVIGKASVLDEIINYIQSLQ 188
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MDPAPSLAAE LWRLHHHHLP AAAAAPLESA SVVTDQGNGS RGGGGGSSGR RRPRREAGAE 60 DDSSKIVSTS AGGGGGQGSV APEAKRLKPM KSSDNNDSLR TEAETESGNS SKAADKNSAP 120 PDPPKQDYIH VRARRGQATD SHSLAERARR EKISERMTIL QDLVPGCNKV IGKASVLDEI 180 INYIQSLQHQ VEFLSMKLEA VDSHMNNGIA VFPVKDFGGQ PYHTAAGLTF DPQTPREYSH 240 TQGSTTEWLH MQIGNAYERV T
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK242645 | 0.0 | AK242645.1 Oryza sativa Japonica Group cDNA, clone: J090025G02, full insert sequence. |