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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR07G04600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 294aa MW: 30685.6 Da PI: 6.6826 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR07G04600.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 26 | 1.7e-08 | 144 | 188 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L++l+P+ K + a++L + +Y+k L
LPERR07G04600.1 144 HSIAERLRRERIAERMRALQDLVPNT-----NKTDRAAMLDEILDYVKFL 188
99***********************7.....5***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAGQHPPTGG GAEDDFFDHF FSIPSAAAAG GGGSGGLGLG SGDHHPFPLA LSLDAAAAAE 60 GAAGGGHDGG RTDRDPVQLA GLFAPVFGGA GGGVQPPHLR APPPPQVFHA QPKPGEGAMA 120 APQPQPPAPR PKVRARRGQA TDPHSIAERL RRERIAERMR ALQDLVPNTN KTDRAAMLDE 180 ILDYVKFLRL QVKVLSMSRL GGAGAVAQLV ADIPISVKGE ASDSGSKQQI WEKWSTDGTE 240 KQVAKLMEDD IGAAMQFLQS KALCMMPISL AMAIYDTQHS QDGHSVKPEP NTPS
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Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP096075 | 0.0 | FP096075.1 Phyllostachys edulis cDNA clone: bphyem116n19, full insert sequence. |