PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G00630.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 264aa    MW: 27796 Da    PI: 6.3047
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G00630.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY23.98.3e-081341573659
                      EEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  36 kkversaedpkvveitYegeHnhe 59 
                      k+vers++dp++v++tYeg+H h+
  LPERR07G00630.1 134 KRVERSSDDPSIVITTYEGQHCHH 157
                      89*******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-7105133IPR003657WRKY domain
SuperFamilySSF1182901.7E-12112157IPR003657WRKY domain
PROSITE profilePS5081111.853115159IPR003657WRKY domain
SMARTSM007743.3E-11120158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-6134158IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MAMPAGDWPF SAAEAYADSS AIFAELGWAN GFAGDGDDAV EDLMLPPLDP PEATPPRPET  60
PAGSVDGAAA SSCSTDVDAA DRKPATEAAS KSPALGKKGG KKRARQPRFA FMTKSEIDHL  120
EDGYRWRKYG QKAKRVERSS DDPSIVITTY EGQHCHHTVT FARARAGAGG FSHVHAVAAA  180
AALTPFSAPN QLYSNLLQSA PAATITTSPV MITSSSLLQP LHCNQELQVV ASSYQSSSSS  240
SPASVPIDKG LLDDMVPRAM RHGQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G00630.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658215.16e-92PREDICTED: probable WRKY transcription factor 57
TrEMBLA0A0D9WUQ80.0A0A0D9WUQ8_9ORYZ; Uncharacterized protein
STRINGLPERR07G00630.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21253796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.26e-30WRKY DNA-binding protein 57