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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR06G09390.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 427aa MW: 46371.5 Da PI: 6.5133 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR06G09390.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.1 | 1.8e-09 | 259 | 307 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq
LPERR06G09390.1 259 NSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 307
58*************************9....556*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MDDKDNTDLE KSEASEHSQT QTLSFHGGAM FLPEAQIASS ANALTSMANP FPIPPGLWNP 60 PAQSINLGET SFSSLLGMLS AGAPPFAATS GFIDSGTGFP CYNGGNLGAM INHSFPSTQP 120 LGDFHNGVEP CREIEAIASE GCKDVSLTGE KQQEDSVMRH AVDSSGKELS KPERNDEGPR 180 VSSSKKRKRS GQDGGVKHVE GGEQSATVGS VQKNENEKSE TKRSSVASGK SSGKETKDNA 240 GSPKEDYIHV RARRGQATNS HSLAERVRRE KISERMKYLQ DLVPGCSKVT GKAVMLDEII 300 NYVQSLQRQV EFLSMKLATV NPTLDFNIER IVSKDIFQSQ STTTSSTFGF LPDTVHSRLH 360 PPKYTQVGMP SILNSIDAFG RVTHTQVGTN CAFKEPKHQM SNNLSGEFQD VIEMPFTHGY 420 HRSDDQS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 178 | 187 | PRVSSSKKRK |
2 | 184 | 189 | KKRKRS |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK103853 | 0.0 | AK103853.1 Oryza sativa Japonica Group cDNA clone:J033148M07, full insert sequence. |