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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR06G04980.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 433aa MW: 42818.3 Da PI: 5.2476 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR06G04980.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.1 | 1.8e-09 | 223 | 266 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ E RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
LPERR06G04980.1 223 MTESLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 266
67999******************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 433 aa
Download sequence Send
to blast |
MQPSSRDTAG AGAGDGGAQD DFFDQMLSTL PSAWADLGGG GAAGKSPWEI AAAGGEVDPS 60 AAQVFDESAL LASRLRQHQI GGGGVGGEKP VMLQLSDLHR QASGGGEEDG GGGAFSPLPL 120 FTDRTNVPPR EEIDGGGGGG FKSPNATGGG DHAMFNGFGV QPPFGQGGSM SGQSFGGGGT 180 AASGGTAPVS EEGRRRRGSS GCARGEGKPP THTASPNTRL LTMTESLRRE RIAERMKSLQ 240 ELVPNANKTD KASMLDEIID YVKFLQLQVK VLSMSRLGGA AGMAPLVASM SSEGNSNGSG 300 NGGGGKASKV NNGGEGGGGG SGGGMRVTEQ QVAKMMEEDM GTAMQYLQGK GLCLMPISLA 360 SAISSATSSA SLLSRPAIRH TAPPQMLDAA AAVAGCGGPA SPAGMSNGNA AAAAGVGDDA 420 RHAQDGGAGG GTQ
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