|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR06G03910.2 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
bHLH |
Protein Properties |
Length: 306aa MW: 33678.9 Da PI: 6.6516 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR06G03910.2 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 51.1 | 2.4e-16 | 105 | 151 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn E+rRR++iN+++ L++l+P++ K +Ka++L +A+eY+k+Lq
LPERR06G03910.2 105 VHNLSEKRRRSKINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 151
6*************************7.....5******************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009409 | Biological Process | response to cold |
GO:0010114 | Biological Process | response to red light |
GO:0010154 | Biological Process | fruit development |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0048440 | Biological Process | carpel development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MDMDEHGRHA LLLLQQQQRR RREQQQQQEM EEEEEARRQM FGAMVGGGLA AFPSSAQGMV 60 DCGGEGGFCD SEAGGSSEPE QQPAEAAAAR PRGGSGSKRS RAAEVHNLSE KRRRSKINEK 120 MKALQSLIPN SNKTDKASML DEAIEYLKQL QLQVQMLSMR NGVYLNPSYL SGALEPAQAS 180 QMFAALGGSN VTVAHPGTVM PPVNQSSGAH HLFDPLNSPS QNQPPSLILP SVPSTAIPEP 240 PFHLESSQSH LRPFQLPGSS EMVFHGEMMP KHHLASHQES LPVKNENEML RTWLLGTEIR 300 CERRMT
|