PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR06G02700.2
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 719aa    MW: 77373.6 Da    PI: 8.4078
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR06G02700.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30377436159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  LPERR06G02700.2 377 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQVQRCADDMSILITTYEGTHNHP 436
                      58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31362436IPR003657WRKY domain
SuperFamilySSF1182903.79E-27370437IPR003657WRKY domain
PROSITE profilePS5081128.311372438IPR003657WRKY domain
SMARTSM007743.4E-37377437IPR003657WRKY domain
PfamPF031063.6E-27378436IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MMSGLQLTKR VRMICYFQKV SVVRTNSCFS FLGTFLTSLN EAGFIIFINF YSLTDDRGNQ  60
IGPYRGEYRI FDLTKTGTKG RREGAEGRNL RRGEGLCCSK QLASLYMEMI KQEKQFVAHE  120
ERLKDEVIKD DGQISDGNFF KSLQNISIRK EELCSPSPTE RLCMDSSSRQ TSINLKAQNK  180
VLGQDDKFAS TRAEMGEVRE ENERLKTLLS RISQDYRSLQ MHFHDVLQQE QPKKLPDSPT  240
AIPADIEEPE FVSLRLGTST SKRKKEDKST TGEVKGSGCT EDFLKIKGGL SLGLSDCRVG  300
ANNSDKMQPD VMTLSPEGSF EDAKDDTIET TEQWPPSKML KNLRSPGTEV EDDDMAPQPQ  360
VKKARVSVRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAAGCP VRKQVQRCAD  420
DMSILITTYE GTHNHPLSVS ATAMASTTSA AASMLLSTSS TSSLAAYHHP HHHYPSSSSS  480
SSVAVSNGRP FFLPPAAASI TSTPSYPTIT LDLTSPSPAT TNAAFSLTGS NRFSSTFTTP  540
HAGGARLYPP TGGFTFSGSG AAANNPWTTP GYLSYGGSSL PAAHPPYKSS PPSSSSSFYQ  600
IQQQQKSAAA AAPASAITDT IAKAITADSS FHTALAAAIT SYVGTTAATT PATEDNGKVE  660
LNLGLGMGHS PPSMTSSAAS AVQSSSSRMF LQPSPSLGIS GSTASASSTS PVANREQAH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-19364437173WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR06G02700.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015643468.10.0probable WRKY transcription factor 72 isoform X1
TrEMBLA0A0D9WLR80.0A0A0D9WLR8_9ORYZ; Uncharacterized protein
STRINGLPERR06G02700.20.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-64WRKY DNA-binding protein 72