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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR05G18130.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
CPP |
Protein Properties |
Length: 333aa MW: 37405.3 Da PI: 8.1499 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR05G18130.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 44.1 | 4e-14 | 44 | 81 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
+k+C Ckks+Clk+YC Cfa g +Cs++C C+ C+Nk
LPERR05G18130.1 44 CKHCACKKSRCLKLYCPCFAGGGYCSDKCGCQPCFNKA 81
89**********************************85 PP
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2 | TCR | 49.9 | 6.4e-16 | 129 | 165 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
k+gCnCkks+ClkkYC+C+++g+ Cs C+CedC+N
LPERR05G18130.1 129 KRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCRNP 165
78*********************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MEPLAPQPVS IVAEAAEPCS MNQLALTPTP KRQKVEEGAD GNGCKHCACK KSRCLKLYCP 60 CFAGGGYCSD KCGCQPCFNK ALYAETVQTT RKVLLSRQKR MSLKINRRSE ANAEAVEDAH 120 HSSSSTPPKR GCNCKKSSCL KKYCDCYQDG TGCSLFCRCE DCRNPFGKNE GIMAEESKRF 180 LYTGADLDHS EDEHDFIVER SPRLQSPISK ESSFQQTPPH IRAGNRDTHM FPQALSQWQP 240 RSWHCSKRQS NDRVIDDSGE YKNSNHDWQL SKQEDSYSIS RCVQILNGMA ELSQVEKSVA 300 PDVFLQAGNR EIFISLSGDV RALWLKRKIQ NLT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK108053 | 0.0 | AK108053.1 Oryza sativa Japonica Group cDNA clone:002-137-H05, full insert sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G22760.1 | 2e-45 | Tesmin/TSO1-like CXC domain-containing protein |