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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR05G17760.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 287aa MW: 30671.9 Da PI: 4.8484 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR05G17760.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12.4 | 0.0003 | 195 | 215 | 34 | 54 |
TTS-STCHHHHHHHHHHHHHH CS
HLH 34 pskKlsKaeiLekAveYIksL 54
p K + a++L +A+eYIk L
LPERR05G17760.1 195 PTFKTDTASVLHEAIEYIKFL 215
5669999************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MADEWWINSA APARTGDDEA AACSTAPVSD ESSAARSSAP MSFCQSGLLP DAAAASSLPS 60 PFLFADRHMD YWTQDFIGGR SAPAGEAAAA AADASFNTLL QLQGDAASHQ LLLDAMVAPQ 120 GQGVSPYEQD SRFVGSSEIF GQPAMEEEQP QFHLQALSNT ERLHQNASSS AATRSSPGSP 180 AAAKKPRIET PSPLPTFKTD TASVLHEAIE YIKFLHDQVA SLSSPYLRCG RPMQQQHQEG 240 HKAKDNGEAK QDLRSRGLCL VPVASTYTVA NETAMDFWHP TFGGTFR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT837834 | 2e-71 | CT837834.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA129D11, full insert sequence. |