 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR05G14390.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
NAC |
| Protein Properties |
Length: 268aa MW: 29806.9 Da PI: 5.9296 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR05G14390.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 139.6 | 1.9e-43 | 4 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lppG+rF Pt+eelv++yL++k++g++ ++e+vi+ +d+++++Pw+Lp + +++ + w++F++r++++a+g r++r+t sgyWka
LPERR05G14390.1 4 LPPGYRFYPTEEELVCFYLRHKLDGRRgSDIERVIPVADVCSLDPWQLPGtsqvhqgAWTGDGEPWFYFCPRQEREARGGRPSRTTPSGYWKAA 97
79***********************998888889**************94365554433347779***************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+ v+s++g+ +g+kkt+vfy+grap g+kt+W m+eyr+
LPERR05G14390.1 98 GTPGWVYSADGRPIGTKKTMVFYRGRAPAGTKTKWKMNEYRA 139
****************************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MGELPPGYRF YPTEEELVCF YLRHKLDGRR GSDIERVIPV ADVCSLDPWQ LPGTSQVHQG 60
AWTGDGEPWF YFCPRQEREA RGGRPSRTTP SGYWKAAGTP GWVYSADGRP IGTKKTMVFY 120
RGRAPAGTKT KWKMNEYRAL EDEADADAAR AAVPALNPYL QTKSEFSLCR LYTRSGCPRQ 180
FDRRPSSSVA GGGRSENPGP SALANADAET GQGQKRKRSP ENDGTSSSDD NGDGNGSILQ 240
PQQQRQRSAD EELVECNMID WADFLDWI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-31 | 4 | 174 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-31 | 4 | 174 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-31 | 4 | 174 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-31 | 4 | 174 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-31 | 4 | 174 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 1e-31 | 4 | 174 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-31 | 4 | 174 | 17 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK063703 | 0.0 | AK063703.1 Oryza sativa Japonica Group cDNA clone:001-119-G11, full insert sequence. |
| GenBank | JN185442 | 0.0 | JN185442.1 Oryza sativa Japonica Group NAC transcription factor 12 (NAC12) mRNA, complete cds. |
