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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR05G03680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 90aa MW: 10063.7 Da PI: 9.8843 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR05G03680.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12.7 | 0.00023 | 27 | 70 | 17 | 55 |
HHHHHHHHCTSCCC........TTS-STCHHHHHHHHHHHHHHH CS
HLH 17 NsafeeLrellPkas.....kapskKlsKaeiLekAveYIksLq 55
++++e Lr+l+P + +++ l+ e L +A +YI Lq
LPERR05G03680.1 27 KERMEALRSLVPGSGeaaaeIDGGRQLDAEELLFRAADYIARLQ 70
6789*********7779995555555****************98 PP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC087425 | 3e-34 | AC087425.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0676G05, complete sequence. |
GenBank | AP014961 | 3e-34 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
GenBank | CP012613 | 3e-34 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |