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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR05G02370.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 468aa MW: 48733.9 Da PI: 5.4088 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR05G02370.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 51.3 | 2.2e-16 | 287 | 333 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L+el+P++ K +Ka++Le+A+eY+k Lq
LPERR05G02370.1 287 VHNLSERRRRDRINEKMRALQELIPNC-----NKIDKASMLEEAIEYLKTLQ 333
5*************************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MSEAGNDLAE LLWDNGPAIR RPPAATTTPF PPFSCSVSST PHDVFKMRGG AGAEDDDDDD 60 TVPWLHYDGG DGDGDGDTAP LPPDYCSALL SGFSGAVVPS TSAAPAPPPA TESVTKQTRT 120 SGGGGVMNFT FFSRPLQRSQ PGGETASSSA SASVAVESMV VQTATNRLRT TPLFSDHRMA 180 WLQPPPPPPP RAAPTPAPLL PTTTPAPAAA APPPPPPAAT TATATATTSS VCSGNGDRSQ 240 LKRRDNTTQS TDWSASQDEL DLDDEPAAAH RRSSAARSSK RSRTAEVHNL SERRRRDRIN 300 EKMRALQELI PNCNKIDKAS MLEEAIEYLK TLQLQVQMMS MGTGMCMPPM MLPAAVAMQH 360 LQMQQMAHFP QFGAAMGLAA GFGMAGAAAG FDMVPMPRLA AGQFPCPMFP AAAAPPPMAM 420 FAAAPPPAPP QFPLAAAAGE QAAAPGGADA AGDVPVVPQG HQRQTKQS
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Functional Description ? help
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Source |
Description |
UniProt | Atypical bHLH transcription factor that acts as negative regulator of grain size. Binds the transcription factor ILI6 and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway. {ECO:0000269|PubMed:22363621}. |