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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR05G01780.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
Trihelix |
Protein Properties |
Length: 265aa MW: 29901.9 Da PI: 5.2912 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR05G01780.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 64.2 | 2.8e-20 | 54 | 121 | 1 | 68 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68
+W++ e+ a +++r ++++++ ++k++k+lWe+ s+++++ gf+r+p qCk+kw+nl +r+k +++ +
LPERR05G01780.1 54 QWSHAETAAFLAIRADLDDSFLSTKRNKALWESASARLHSLGFSRTPDQCKSKWKNLVTRFKGTAAAA 121
7*************************************************************998765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MDPFHHLNSS FSNPYHPLLA ASPPHHFDPL LDPPPPPPLP GGGEASIERE RLPQWSHAET 60 AAFLAIRADL DDSFLSTKRN KALWESASAR LHSLGFSRTP DQCKSKWKNL VTRFKGTAAA 120 ATPAVDPTEQ MMGTRGSSTS SSSFPFHDEL RRIFESRAER ARALDQMRKK VKGKDQVDDE 180 DDQEDDDDDG DQNQHQVDED DDAAAADTAA RAKKRRRKAA ERRNPTTAAE GEVEAMLREF 240 MRRQVEMEER WMEAAEAREA ERRDV
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