|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR04G09550.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
Family |
bHLH |
Protein Properties |
Length: 335aa MW: 35739.8 Da PI: 6.6334 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR04G09550.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.1 | 1.2e-11 | 114 | 157 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
Er RR+++++ f++L llP+ s+K +Ka+i+ +A+ YIk L+
LPERR04G09550.1 114 TERERRKKMKNMFSTLHALLPEI----SGKADKATIVGEAIGYIKTLE 157
7*********************6....6*****************995 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MSQEGADLPR DIDESIDHVV TATANNPVRS IKIEKSLSCS SSDKPGEPNA GLKAASPMVI 60 GMNTKINEEG KSIAIKREEV EGGGDGADIS SGVGTCRNNR KAKSDMEHAL HIWTERERRK 120 KMKNMFSTLH ALLPEISGKA DKATIVGEAI GYIKTLEDVV QKLEALKMER MLAAQQSAAA 180 NANAGEGSSR SQPPHHASMP VPVDGLISNM CQQQQQQQAV AVAVAAGGGG SLPLGTATPS 240 LKTWSAPSIT MTMAGMDAFI YICLPRQGVS FTTVAFVLEK HQIDVVTFTI SAEPEKTLIS 300 VNARLNEESL QSTKGLTPEA KYKLAVSELM TRLAE
|