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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR04G09540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 356aa MW: 39179.4 Da PI: 7.7608 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR04G09540.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.5 | 5.6e-09 | 130 | 183 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkas...kapskKlsKaeiLekAveYIksLq 55
h E RR++++s+f+ L l+P++ + + a+ + +++YIk+L+
LPERR04G09540.1 130 HACTEGERRKKMKSKFDHLHALVPNLLkkmYRVTRQTNRATLVDSTIDYIKQLE 183
888999*******************66585444455****************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MSQNNTNLPQ GIDKIHDHAF TNTLIVLTKM EYSDSSNARE KNTSSRPASP MVSGDVVEIK 60 ATRTDIVDDD EEERGESGGR DGIAREANEP KSKRSFDELV DLGPRAGDGR NGGSGKKKGK 120 NSIDVTHKLH ACTEGERRKK MKSKFDHLHA LVPNLLKKMY RVTRQTNRAT LVDSTIDYIK 180 QLEGNIKKLE MLKKERMLVS TAANNGSTSA PPPPPSLEVE KTTTPREITL ADLVNVWEAE 240 APLAPPPAVV TNDASTLARM QTWTGANMTV SLTGRDAFIT VSLPRPRDQS LFSTTLSILE 300 RHHIDVITAT VSTPELDTAL LSMHCQLRQE GSSSQNLTVM DKYKLAVSEL VLWVAI
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