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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR04G05850.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 440aa MW: 45344.8 Da PI: 7.1416 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR04G05850.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.7 | 5.7e-10 | 273 | 320 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq
LPERR04G05850.1 273 SHSLAERVRRERISERMKLLQSLVPGC----NKITGKALMLDEIINYVQSLQ 320
8**************************....999*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 440 aa
Download sequence Send
to blast |
MANEHFFPGD YFSSSSTSSA AAPPPMPPGG FDATAAAAAM AAYGGGMMPL WAAEQMMMAE 60 SAAQQHFDSA LSSLVSSPGA GGGFGMNGAG DDVAIGDLIG RLGSICSGAN NESCYSTPLS 120 SPPRCPPPPM TSFRAYAAAA AGETGRLSRV SSSKSLGAGA GAAALESSEA EMRPATATAT 180 ATAMPETQPP SKPSTTAAAA ARKRKSSAAK AKAAAAASSL PAATAAAEKA SPKRTKVAGD 240 VDGGGEAAAE EEKAEAPKDY IHVRARRGQA TDSHSLAERV RRERISERMK LLQSLVPGCN 300 KITGKALMLD EIINYVQSLQ RQVEFLSMKL ATMNPHLDFD GHYLSSKDMK DMSIPTYPSG 360 DPTAATAFSY TGLPATTDPF TAYNCWELDL HTAMQMGATA TGLNHNTSVT TLVHSPSSLP 420 HHPPPPPHGF YGGSSSRGRQ
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