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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR03G29370.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 300aa MW: 31709.7 Da PI: 7.9223 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR03G29370.2 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 16.3 | 1.8e-05 | 148 | 191 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
n+r r RR+++ +++ L++l+ + +K + a++L +A YI+ L
LPERR03G29370.2 148 NKRPRVRREKLGERIIALQQLVSPF-----GKSDTASVLHEALGYIRFL 191
99**********************8.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MVKEEEIVTE AAGARGYMEL LGLGDQEADY LMCMSPSFYL SSPTASTTTV VASPTPYHQL 60 LSFAGQDQYH GGDVLGFQYY GGDHVIPAIV PQKSSPTAEC SSSISSMSSS PTATGAISSS 120 KPQAFKKKGP RGCDQRKTTA PAAATPTNKR PRVRREKLGE RIIALQQLVS PFGKSDTASV 180 LHEALGYIRF LHDQVQVLSS PYMQRLPPSA RVPVQQSEEQ QQRPNGGDLR SRGLCLVPVS 240 CTEHVTGGDT GHGHGNGADL WAVAAGMAKA TATVTAAVER SKEAAAAALL RGDLPGQQLA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK072833 | 0.0 | AK072833.1 Oryza sativa Japonica Group cDNA clone:J023136C11, full insert sequence. |