 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
LPERR03G28150.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
WRKY |
| Protein Properties |
Length: 393aa MW: 42553.3 Da PI: 10.5119 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR03G28150.2 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.1 | 2.8e-31 | 327 | 385 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh+
LPERR03G28150.2 327 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGDHNHN 385
69*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 393 aa
Download sequence Send
to blast |
MEGMEQSNRE AVESCHRVLT LLSSPHSQLV PNKDLAAATG EAVAKFGSVT SRLNNGNCLN 60
NGNGLQGHAR VRKIKKPLPI FDSNLFLESS AATAATAAKT SNPSPITSLQ LFPRYHQMEG 120
SSSKDPVRIP AQFPKRLLLD NPVVDSDGPS RGLPLQLVQP VSVAPPAGTP PPALPSAHLH 180
FIQQQQSYQR FQLLQQMKMQ SEMIKRSGLG EQGGSTGGGK GVNLKFDSSN CTASSSRSFL 240
SSLSMEGSIA SLDGSRSSRP FQLVSGSQTS STPELGLMQR RRCTGREDGS GRCTTGSRCH 300
CSKKRKLRIR RSIKVPAISN KVADIPADEF SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA 360
RKHVERCVDD PSMLIVTYEG DHNHNRVLAA QPA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK121838 | 0.0 | AK121838.1 Oryza sativa Japonica Group cDNA clone:J033100L17, full insert sequence. |
