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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR03G24050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 328aa MW: 34498.7 Da PI: 6.9023 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR03G24050.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 48.5 | 1.6e-15 | 127 | 173 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++Er+RR++iN++f eL +++P + kK++Ka+iL Av+Y+k+Lq
LPERR03G24050.1 127 EHIIAERKRREKINQRFIELSTVIPGL-----KKMDKATILSDAVRYVKELQ 173
699************************.....9******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MEDSSLFMEW AMETLQHLHP PPPPPSAGGY GGGGADTFPS LQALRESASQ NGMAPPEPAA 60 HEGHRATNSW SSGDTDSPSN EVATARNVPA ARAPAVSPPT RRASAKGGAG GGGGGTGSSS 120 SAPYAQEHII AERKRREKIN QRFIELSTVI PGLKKMDKAT ILSDAVRYVK ELQEKLSELE 180 DQNGRSVESA VLVKKPCIAA ASDGRPSSPA TVAGSSSSSG SCRRSLPEIE AKISHGNLMV 240 RIHCENGKGL LVRLLAEVEG LHLAITHTNV MPFPACTAII TIMAKVEDGF SVTAEDIVGR 300 LNAVLQQHHS RNSAEEKTSC QQQEAATC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 131 | 136 | ERKRRE |
2 | 132 | 137 | RKRREK |