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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
LPERR03G21860.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
G2-like |
| Protein Properties |
Length: 215aa MW: 22821.8 Da PI: 10.777 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR03G21860.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 90.2 | 1.8e-28 | 108 | 157 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ
LPERR03G21860.1 108 PRMRWTTALHAHFVQAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQ 157
9************************************************* PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MATTATAPDL SLHISPPSAA DMAGRSGGGG EMEQLAEPKL CLGFDMVATQ HNGGCSLQQQ 60
QQRLHQPSQI QRFKKSAIGS PVLSGGGGNG GAARSGNGGG GKRSSRAPRM RWTTALHAHF 120
VQAVELLGGH ERATPKSVLE LMNVKDLTLA HVKSHLQASH GYMRDMGFLR TGGGEMDGFD 180
VLGNTSSIAI TNIRSSHQER AIRNKERRIV GLNHQ
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-14 | 109 | 157 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-14 | 109 | 157 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-14 | 109 | 157 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-14 | 109 | 157 | 3 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates carpel integuments formation. Required for the specification of polarity in the ovule inner integument. Modulates the content of flavonols and proanthocyanidin in seeds. {ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:19054366, ECO:0000269|PubMed:20444210}. |
| Publications
? help Back to Top |
- Lora J,Hormaza JI,Herrero M
Transition from two to one integument in Prunus species: expression pattern of INNER NO OUTER (INO), ABERRANT TESTA SHAPE (ATS) and ETTIN (ETT).
New Phytol., 2015. 208(2): p. 584-95
[PMID:25991552] - Skinner DJ,Brown RH,Kuzoff RK,Gasser CS
Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function.
BMC Plant Biol., 2016. 16(1): p. 143
[PMID:27350128] - Gomez MD,Ventimilla D,Sacristan R,Perez-Amador MA
Gibberellins Regulate Ovule Integument Development by Interfering with the Transcription Factor ATS.
Plant Physiol., 2016. 172(4): p. 2403-2415
[PMID:27794102]
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