 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR03G20320.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
Dof |
| Protein Properties |
Length: 330aa MW: 33056.7 Da PI: 8.3272 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR03G20320.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 124.6 | 3.1e-39 | 22 | 82 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+ l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+
LPERR03G20320.1 22 QEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 82
57889*****************************************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010052 | Biological Process | guard cell differentiation |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MAPAAGDEGR KGAAPDGTPP PQEQGLRCPR CDSPNTKFCY YNNYSLSQPR HFCKTCRRYW 60
TKGGALRNVP VGGGCRKNKR SRSAAAASRL SLNLQSVVDA ADPAARLGFH TPPLGGAAAD 120
FQQQGGGGGG GGVGVGMLPM PRLQHSPGGG VGQYVAFGEW PTAGDIGGGG GNAVSSTIAS 180
SIESLSFINQ DLHWKLQQQR LATMFLGPPA SANDTGGGGG QAPPHAAAVG GGGAGFQLHM 240
AGVPISSGSC IEAAAAVPPS VTSWFMDTTC SSYGLPSPPP PSAAGAVATN NTSSINNGGR 300
SSGDDNNAAA SNCGSAISAW GDISTFAMLP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC133003 | 2e-87 | AC133003.3 Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence. |
| GenBank | AP014959 | 2e-87 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012611 | 2e-87 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
