 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
LPERR03G07620.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
YABBY |
| Protein Properties |
Length: 197aa MW: 22089.4 Da PI: 8.7243 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR03G07620.2 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 54.7 | 4.2e-17 | 1 | 48 | 1 | 46 |
YABBY 1 advfssseqvCyvqCnfCntila..vsvPstslfkvvtvrCGhCtsll 46
+d++s se++Cyv+C++Cnt+la v vP + l+ +vtv+CGhC +l
LPERR03G07620.2 1 MDLVSPSEHLCYVRCTYCNTVLAlqVGVPCKRLMDTVTVKCGHCNNLS 48
578999***************9744778****************9984 PP
|
| 2 | YABBY | 95.4 | 1.3e-29 | 82 | 148 | 96 | 162 |
YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
++ +s ++e +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa
LPERR03G07620.2 82 QPLPLISPTSNEASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 148
4445568889999****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MDLVSPSEHL CYVRCTYCNT VLALQVGVPC KRLMDTVTVK CGHCNNLSFL SPRPPMVQPL 60
SPTDHPLGPF HQGPCTDCRR NQPLPLISPT SNEASPRAPF VVKPPEKKHR LPSAYNRFMR 120
EEIQRIKAAK PDIPHREAFS MAAKNWAKCD PRCSSTVSTS NSNPEPRVVS APVPHQERTT 180
EQVVESFDIF KQMERSG
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB106553 | 0.0 | AB106553.1 Oryza sativa Japonica Group DROOPING LEAF mRNA for DL protein, complete cds. |
| GenBank | AY494713 | 0.0 | AY494713.1 Oryza sativa (japonica cultivar-group) drooping leaf (DL) mRNA, complete cds. |
