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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
LPERR03G05400.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
ERF |
| Protein Properties |
Length: 327aa MW: 35258.1 Da PI: 5.5117 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR03G05400.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.9 | 2.9e-19 | 112 | 161 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++G+r+++ +g+W+AeIrdp + +r++lg+f t+eeAa+a++ +++l+g
LPERR03G05400.1 112 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFNTPEEAARAYDVEARRLRG 161
69*******.**********72....35*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MCGGAILAEF IPPPSRAAAA SKRVTAGHLW PAGCKNAGAG KSSKKQRHQR SFADIDDFEA 60
AFEQFDDDFD LDDVDDDEVD FVFTSKSPVA AGYDEGKTAR TAARKKKKGR RHFRGIRQRP 120
WGKWAAEIRD PHKGTRVWLG TFNTPEEAAR AYDVEARRLR GSKAKVNFPT TAAPAAARPR 180
RAAAKKQQQP PAMAGMKREL SPPETAAVPF FAGSFVDLTT TAAVAPPPPA SSFTDSFATS 240
ESGESLAKKM RTSDDSSEGS VGGGETMGFA DDLEFDPFML FQLPYSDGYE SIDSLFAGGD 300
AGSANNNDMS SVNLWSFDEF PIDGSAF
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