PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

LPERR02G27810.1

Organism

Leersia perrieri

Taxonomic ID

77586

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia

Family

GeBP

Protein Properties

Length: 298aa MW: 31460.8 Da PI: 10.5405

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
LPERR02G27810.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	41.4	3.9e-13	91	178	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 ++lws+ D ++lL G f+a+tg p d+ a+y+ +++s+s ++ + + K++r+K K+ + + + +h++ + +l+ ++W LPERR02G27810.1 91 KQLWSDADVVALLDGAAAFRARTGRVPRFpDMAALYDSIRGSLSPHIDQAKVYYKLKRIKGKYLHAAPG-------AAAGPHERRVRDLCASVW 177 689*******************966544********************************99888.......678889999999999999 PP DUF573 97 g 97 g LPERR02G27810.1 178 G 178 7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.1E-13	91	178	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MDATPAPTAP SPPRSSKKRS SRPKPHAGHP VPNPSPLPAA VAVAVAATSS SRNRERERKR 60 RQRSAFADPA TAATAVTAPA PAPGGGGGVQ KQLWSDADVV ALLDGAAAFR ARTGRVPRFP 120 DMAALYDSIR GSLSPHIDQA KVYYKLKRIK GKYLHAAPGA AAGPHERRVR DLCASVWGAD 180 LEPLAAAAVA AAEQPRAVPD AAAAAAAASD QPRSVPDAAA MLPVLTEMLD EYWKTDGRTL 240 SGVALEKGLS LLGTGEARFI ESKWRRQLDS EIQTQMRRHD LAKEVYALLM DAIKGLGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	61	ERKRRQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	LPERR02G27810.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015626514.1	1e-107	STOREKEEPER protein
TrEMBL	A0A0D9VLI4	0.0	A0A0D9VLI4_9ORYZ; Uncharacterized protein
STRING	LPERR02G27810.1	0.0	(Leersia perrieri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2682	27	63