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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR02G23410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
MYB |
Protein Properties |
Length: 335aa MW: 35902.1 Da PI: 4.71 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR02G23410.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT++Ed +l+ +++++G +W++ ++ g+ R++k+c++rw +yl
LPERR02G23410.1 16 RGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWINYL 63
89******************************99************97 PP
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2 | Myb_DNA-binding | 51.5 | 2.4e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T++E+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++l
LPERR02G23410.1 69 RGNFTADEEETIIKLHGLLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114
89********************.*********.************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTADEEETI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRVAQ 120 SQRDQQQQRP TKNKAKAADA SDADTHSPSS SASSSTTANN NGGTACGESK APETIDVSLL 180 EPDIDISDML LDAPPPLTDP LLAAAPPMPP SSPCSSSSLT TTTCVGAVSG DQLLDLPEID 240 IEPEIWSIID GYGDATVTCT TAAANAASAS PGEDEGTELW LENLEKELGL WGPTDEPMAH 300 PDPLGQVCYT GPLTETQGDP VSTYFQEIGS SAVLS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that regulates positively genes involved in anthocyanin biosynthesis such as A1. {ECO:0000269|PubMed:7920701}. |