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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR02G22680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
GRF |
Protein Properties |
Length: 213aa MW: 22462.3 Da PI: 9.8368 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR02G22680.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 80.5 | 1.6e-25 | 133 | 178 | 1 | 46 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46
+++pgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e+s
LPERR02G22680.1 133 EPDPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRSRKPVEPS 178
699***************************************9975 PP
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2 | QLQ | 52.3 | 1.7e-18 | 68 | 103 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
a+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k
LPERR02G22680.1 68 ALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 103
79*********************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MGEEKDGDSP QPPSKQPRLS SADPNAGVVT MAAPPPPVGL GLGLGLGGDS RGERDAETSP 60 ASANKTTALT FMQQQELEHQ VLIYRYFAAG APVPVHLVLP IWKSVASSSF GPHRFPSLMG 120 LGNLCFDYRS SMEPDPGRCR RTDGKKWRCS RDVVPGHKYC ERHVHRGRGR SRKPVEPSAA 180 ATPANNGGGG SGIVFSPTSV LLAHGASAAA RAT
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT834761 | 0.0 | CT834761.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA033I10, full insert sequence. |
GenBank | FJ546694 | 0.0 | FJ546694.1 Oryza sativa Indica Group cultivar IR58 growth-regulating factor 10 (GRF10) mRNA, complete cds. |