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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR02G17000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 451aa MW: 48924.5 Da PI: 5.6665 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR02G17000.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12 | 0.00039 | 317 | 343 | 5 | 42 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKae 42
h+++Er RR++i +++ L+el k a+
LPERR02G17000.1 317 HSIAERVRREKISDRMKDLQELTNK-----------AS 343
99******************98544...........44 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MEKGDDVIFC LLGLRRSAYA QILQHRDTHL SINHQTLVFF LPAELNRLYI YSLTSPPPVS 60 ALHSPVLLHP LSPSPDSNFF SFCREIERMG IDPFMPWWSS SIADTSSGIH VAATSAVDEA 120 TSSFLGEAST AKLQVNLLMQ AELLQQQQHQ SEGIGLAAMD DATAAAAALM LGVPPPPPCF 180 GFGGRITNNG DLLQQEGDGS MYPPRVVDTL LPSPQLQLID DTEINTGNLL SFAPPGQQQF 240 TPNTGNLQIG QKPTQSYSGK KGSAASPVNL SEVLPNGNGS SSAWDGALLL NGNGSSAGNG 300 ARKPRVRARR GQATDPHSIA ERVRREKISD RMKDLQELTN KASMLDDIID YVKLLQFQVN 360 VLSRSRLGAT KADAIFPLPR EPKTEGSGIL LRPRSSGERQ GQSESELAVE VKDEALQLME 420 ESMMTAMQFL QSKGFIFMPL SLASEMRGQK I
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK241924 | 7e-48 | AK241924.1 Oryza sativa Japonica Group cDNA, clone: J075076G04, full insert sequence. |