 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR02G09170.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
NAC |
| Protein Properties |
Length: 366aa MW: 40184.3 Da PI: 7.0174 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR02G09170.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 166.1 | 1.2e-51 | 10 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+ppGfrFhPtdeel+ +yLkkkv+ + ++l +vi+e+d++k+ePwdL + ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+
LPERR02G09170.1 10 VPPGFRFHPTDEELLYYYLKKKVAYEAIDL-DVIREIDLNKLEPWDLIdRcRIGTgQQEEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 102
69****************************.9***************732445443666*********************************** PP
NAM 92 vlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ +g+ +gl+ktLvfy+grap+g+ktdW+mheyrl
LPERR02G09170.1 103 IFLGsgsggGGRRIGLRKTLVFYTGRAPHGKKTDWIMHEYRL 144
**98788777778***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MHPNGAPLTV PPGFRFHPTD EELLYYYLKK KVAYEAIDLD VIREIDLNKL EPWDLIDRCR 60
IGTGQQEEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIFLGSGSG GGGRRIGLRK 120
TLVFYTGRAP HGKKTDWIMH EYRLDDDNVD IPEEGWVVCR VFKKKSIHPR GLFDHQPDMA 180
AAAGGEDDEL RHHLYGAADS GMSPAAAVDQ KHVLHQQQQL TSAHGGGGFV VPAFDHSMHL 240
PQLADATPAS CNGGGHVAFA SSMNTLDAVG CGAQNMMKQL ASAANSGGEI LMSAVVDGGG 300
RFGAAADWSI LDKLLASHQN LDQIFHGKTH HHQQQQQMGI DTSSLQRLPL HHYLGLEAAD 360
LLKFAM
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-50 | 8 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-50 | 8 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-50 | 8 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-50 | 8 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 8e-50 | 8 | 166 | 15 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 8e-50 | 8 | 166 | 15 | 167 | NAC domain-containing protein 19 |
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