 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR02G08020.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
TALE |
| Protein Properties |
Length: 404aa MW: 42835.1 Da PI: 6.6421 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR02G08020.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 27.5 | 5.5e-09 | 327 | 365 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+Fe+ +yp+ +e+e LA++ gL+ +qV++WF N R +
LPERR02G08020.1 327 MFENflRPYPKDSEKEMLAARSGLSRNQVSNWFINARVR 365
57766689*****************************88 PP
|
| 2 | BELL | 30.9 | 7e-11 | 199 | 259 | 9 | 72 |
BELL 9 kakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
++ Ll++l+ +d++Y+q+ +++qt + F g g+a + + +A +a+S + L+ +ia+ i
LPERR02G08020.1 199 RSELLTILQLMDQKYNQCLDEIQTTTARFS---GAGAAGICAPFAHRAVSAMYHGLRRRIAGEI 259
689************************995...899999*********************9876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008285 | Biological Process | negative regulation of cell proliferation |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0010073 | Biological Process | meristem maintenance |
| GO:0010227 | Biological Process | floral organ abscission |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
| GO:0090470 | Biological Process | shoot organ boundary specification |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MVDFHPTMSS NPSFSHFGFD AMNGYFMSTA TGNALLAAGD SPLFHPTMAP PDHGGETAAM 60
EFAAANNLVL ASLATQLFGA APAPPQPEEE MGGGGGGYGV AGGESSGAVS LACLGHSDAM 120
AAASAGWSPE KKPSCNWIGN NAGGWLFAGL PEAAAAAGFV YAATPATASE LSLSLCSRSS 180
SESFLNAAAA GDATSHRLRS ELLTILQLMD QKYNQCLDEI QTTTARFSGA GAAGICAPFA 240
HRAVSAMYHG LRRRIAGEIM SATARPCRGG HESSSAVTGG GERERNWESA FIQKHWAVHQ 300
LRRGEQQCWR PQRGLPEKSV AVLKAWMFEN FLRPYPKDSE KEMLAARSGL SRNQVSNWFI 360
NARVRLWKPM IEEMCEELKR SSSGISGGNQ ALAMEHLSSQ DVVS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK109849 | 1e-144 | AK109849.1 Oryza sativa Japonica Group cDNA clone:002-148-F06, full insert sequence. |
