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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR02G03410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
HD-ZIP |
Protein Properties |
Length: 251aa MW: 26716.4 Da PI: 8.2325 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR02G03410.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59 | 8e-19 | 135 | 189 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++++eq + Lee F ++ +s++++ eLA klgL+ rqV vWFqNrRa+ k
LPERR02G03410.1 135 RKKLRLSREQATLLEESFSAHNILSHAQKHELAGKLGLSARQVEVWFQNRRARTK 189
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 114.5 | 6.6e-37 | 135 | 223 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
+kk+rls+eq++lLEesF++++ L++ +K+ela +Lgl++rqv+vWFqnrRARtk+kq+E d+e L+r++++l++en+rL+++ ++Lr+
LPERR02G03410.1 135 RKKLRLSREQATLLEESFSAHNILSHAQKHELAGKLGLSARQVEVWFQNRRARTKLKQTEADCEILRRWCERLADENARLRHDLADLRS 223
69***********************************************************************************9985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MTSSSSLTTT TTSSNMEADS AVEFSDTRLS LAIGCSPSAP PPPPAAEQRR AVVLFGELFP 60 APPRESSSPA TAAAGGHTIS VGKRDQRGET AATTRNNSSS KKARTAVRGG GGDDDDGVDR 120 WSPSGGGGDD EGANRKKLRL SREQATLLEE SFSAHNILSH AQKHELAGKL GLSARQVEVW 180 FQNRRARTKL KQTEADCEIL RRWCERLADE NARLRHDLAD LRSSSFYSSL SAAAVCSSCA 240 GAAAGEDTRR Q
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 183 | 191 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |