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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR01G37100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
Trihelix |
Protein Properties |
Length: 311aa MW: 32906.7 Da PI: 7.5084 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G37100.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 69.4 | 6.9e-22 | 23 | 98 | 1 | 72 |
trihelix 1 rWtkqevlaLiearremeerlrrg....klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72
rWt++e+l+L++a+r me+r + g + +W++vs+++r++g+er+p qC+++w nl+++ kki ++e+kr+
LPERR01G37100.1 23 RWTRHETLVLLQAKRGMERRGGGGgrwsSPVRLKWAAVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWENKRN 98
8*******************997433337889*****************************************984 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MSGAGNASSP AAAASTPRSR LPRWTRHETL VLLQAKRGME RRGGGGGRWS SPVRLKWAAV 60 SAYCRRHGVE RGPMQCRKRW GNLSWDLKKI VAWENKRNGL AGGEDVAVAS FWEMRGEQRR 120 ARQLPSSFDR EVYDLLVGGG GGGGDDVAPP FEFGEDLAGD GDGDGDDADE LPPLMVMPIS 180 ARKYVPPAAS SQQECSDPAT VSAKKGGAAA SDKNSTSQHD GGVGGGDMKD SEATYFAGIG 240 GEEGTTTATA TATTTSIGKQ VIEALERGNR MLGDHLEAQR SIWAVERDQR AALLAAVDKL 300 AVAVGRIADK L
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