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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR01G35240.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 371aa MW: 39064.7 Da PI: 8.0787 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G35240.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.6 | 4e-12 | 305 | 350 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L++l+P+ +k + +++L Av+YIk+Lq
LPERR01G35240.1 305 SIAERERRTRISKRLKKLQDLVPNM----DKQTNTSDMLDIAVNYIKELQ 350
689*********************7....688*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010119 | Biological Process | regulation of stomatal movement |
GO:0005829 | Cellular Component | cytosol |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MNRLTPSHGG MPPPPPQAMG RLGQQPSSLA RYGSAPGSLL ASIADSVIRG GDHPIPFPAT 60 AAGGMVMPRY HYSGESSGLT SCESSCGRTT AAAPPPPPPP PPPPQTLERA YGGSGEIHVS 120 AAMAPHDGGG GGVPLFRHSS SPAGLLSRLM ADPHGMAATR GMGSYSGSDA MAQRRLSSQW 180 SFSRQDLPQI SEMGGIIPDI GESIVTGGSS SDGGGAGQSS SFLSRNFSMS SWDDTNSNIM 240 FSPPNSSKKA RLGDHGDDFS NIDSQFGLSK SSLEMPGMDD FMQLQSDSIA CRARAKRGCA 300 THPRSIAERE RRTRISKRLK KLQDLVPNMD KQTNTSDMLD IAVNYIKELQ GQVQELKNDQ 360 ANCTCSGKLS C
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK068254 | 1e-117 | AK068254.1 Oryza sativa Japonica Group cDNA clone:J013149F02, full insert sequence. |
GenBank | AK105713 | 1e-117 | AK105713.1 Oryza sativa Japonica Group cDNA clone:001-201-E12, full insert sequence. |
GenBank | HQ858859 | 1e-117 | HQ858859.1 Oryza sativa Japonica Group isolate UT1668 bHLH transcription factor mRNA, partial cds. |
GenBank | HQ858868 | 1e-117 | HQ858868.1 Oryza sativa Japonica Group isolate UT1677 HLH transcription factor mRNA, partial cds. |