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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
LPERR01G34430.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
LBD |
| Protein Properties |
Length: 255aa MW: 26319.6 Da PI: 8.0505 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G34430.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 137 | 6.8e-43 | 32 | 130 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+CaaCk+lrrkC++dCv+apyfp ++p+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+v++i+ lq++l+ql+++l
LPERR01G34430.1 32 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDL 125
7********************************************************************************************* PP
DUF260 95 allke 99
a++k
LPERR01G34430.1 126 ARAKF 130
99875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009799 | Biological Process | specification of symmetry |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009954 | Biological Process | proximal/distal pattern formation |
| GO:0048441 | Biological Process | petal development |
| GO:0005654 | Cellular Component | nucleoplasm |
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MASSSASSVP APSGSVITIA SAAAATCGTG SPCAACKFLR RKCQPDCVFA PYFPPDNPQK 60
FVHVHRVFGA SNVTKLLNEL HPYQREDAVN SLAYEADMRL RDPVYGCVAI ISILQRNLRQ 120
LQQDLARAKF ELSKYQVAAA AANNGMAEFI GNAVPNGQSF INVGHTAALA SIGGSAACFG 180
QEQFSTVQML SAARSYEGEP IARLGGNGGY EFGYSTAAMA GGGAGHMSGL GTLGGGPFLK 240
SGIAGSDETR SGAGQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation (By similarity). {ECO:0000250}. |
| UniProt | Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB200237 | 1e-150 | AB200237.1 Oryza sativa Japonica Group CRLL3 mRNA for LOB domain protein, complete cds. |
| GenBank | AK071407 | 1e-150 | AK071407.1 Oryza sativa Japonica Group cDNA clone:J023089G14, full insert sequence. |
| GenBank | AK119575 | 1e-150 | AK119575.1 Oryza sativa Japonica Group cDNA clone:002-117-B04, full insert sequence. |
| GenBank | EF540766 | 1e-150 | EF540766.1 Oryza sativa Japonica Group LOB domain protein 6 mRNA, complete cds. |
