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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
LPERR01G28830.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
bHLH |
Protein Properties |
Length: 404aa MW: 42804.5 Da PI: 6.5793 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G28830.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 17 | 1.1e-05 | 294 | 331 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
R +++ +++ L++l+ + +K + a++L +A+eYIk L
LPERR01G28830.1 294 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 331
677888999*******998.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MADEWWSASQ RGHGTSACSA APPLTDRASS CGWTSPAAAA AAESTSSITF QDPSRCSTTT 60 HHHQQPLYDA ASSLGDPHMD WTQAFLSGRT DASFQAVLQD DMAASTRPFR AQTTTAVIDE 120 SAMNNPFRDM GMSQGLLLDQ VSSLASSAPY GTVQLQGMSF DGAGDQPVAA AHHSITTTFG 180 DYQHSASYDA AAAMQFAQTP SPSLPAAAQM QFSSSGSYQL PFGGAPLPSQ LLLQAMQPKP 240 SCSSNANTLM AKSNSGSAQQ ACSSAGRKSV PDSPAAAKRP RIEAPSPLPT FKVRKEKLGD 300 RITALQQLVS PFGKTDTASV LHEAIEYIKF LHEQVASLSS PYLKNGNPLQ QFQQKGSEST 360 KDTGEAKPDL RSRGLCLVPV ASTYTVASET VPEFWHPTFG GTFR
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