 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR01G26540.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
WRKY |
| Protein Properties |
Length: 304aa MW: 33030.5 Da PI: 4.7033 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G26540.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.3 | 4.2e-30 | 90 | 148 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+v+ +tY+ eHnh+
LPERR01G26540.1 90 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTVLLVTYSFEHNHP 148
69*************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MDRSTSGEDG SCSAGTDSPS PREESVDEQG AAEESSPAPG GLKRELPSPS SPLPPPAKRS 60
RRSVEKRVVS VPIAECGDRP KGAGEGPPPS DSWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 120
CPARKQVERS RADPTVLLVT YSFEHNHPWP QPKSSSCHAS KSSPRLTTAP KPEPAADDQE 180
HPDPAENESS SVELDVPEKE PEPVVKQEQE MEQKVAVIEP AAAVTATVAP AAVEVEEENL 240
DFGWIDQYHP TWHRSYAPLM PPEEWERELQ GDDALFAGLG ELPECAVVFG RRRELSMAAT 300
APCS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK067329 | 0.0 | AK067329.1 Oryza sativa Japonica Group cDNA clone:J013100D22, full insert sequence. |
| GenBank | AY870602 | 0.0 | AY870602.1 Oryza sativa (japonica cultivar-group) WRKY13 mRNA, complete cds. |
| GenBank | CT841583 | 0.0 | CT841583.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C103H04, full insert sequence. |
