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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
LPERR01G17340.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
LBD |
| Protein Properties |
Length: 192aa MW: 20787.2 Da PI: 10.617 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G17340.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 55.6 | 1.5e-17 | 31 | 138 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakd.CvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeer..........edamsslvyeAearardPvyGavgvilkl 83
+CaaC +l+ +C+ C++apyfpae++++f+++ +lFG +++l+ ++a + + m+++v+ A+a a dP + + v lkl
LPERR01G17340.1 31 PCAACTLLGLTCTLArCPMAPYFPAERRERFRYAFHLFGIKTILRSIRAQVPGPAsssisslwksTFGMAAIVFTADASAADPARLSDDVRLKL 124
7***********9655*******************************9984444335677888777889************************* PP
DUF260 84 qqqleqlkaelall 97
+qql++lka a l
LPERR01G17340.1 125 SQQLDRLKAFRAIL 138
*******9977665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MPAPASTPIT PPPPAPGRLP CSRQYVGPLL PCAACTLLGL TCTLARCPMA PYFPAERRER 60
FRYAFHLFGI KTILRSIRAQ VPGPASSSIS SLWKSTFGMA AIVFTADASA ADPARLSDDV 120
RLKLSQQLDR LKAFRAILMQ QKQQNKKRPQ QQPPYAVETA HDSTSTVDAA AALATRMQML 180
RLNAAAANGE LP
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