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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
LPERR01G17330.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
LBD |
| Protein Properties |
Length: 186aa MW: 20613.9 Da PI: 9.2558 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G17330.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 44.3 | 5e-14 | 30 | 140 | 2 | 100 |
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeer.............edamsslvyeAearardPvyGavgvilk 82
Ca+C +l+ +C + C apyfpa++ ++f ++ +lFG +++++ l+a + r + m+++v ++a + +P + ++ l+
LPERR01G17330.1 30 CASCTHLGLTCRPRCRTAPYFPADRLERFLYACRLFGLKTIVRSLRAE-ADGRmgecrwfwnksnkTPSMAAIVLLSDAAVAEPERVIRKFELH 122
*********************************************995.333445666777777668899999999999999999999999999 PP
DUF260 83 lqqqleqlkaelallkee 100
q++l+++++ l+++ ++
LPERR01G17330.1 123 RQRRLQCKANRLQKQSQQ 140
999999999888887765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MSTSTALAPP AGRPPCAART HVDAAPRPTC ASCTHLGLTC RPRCRTAPYF PADRLERFLY 60
ACRLFGLKTI VRSLRAEADG RMGECRWFWN KSNKTPSMAA IVLLSDAAVA EPERVIRKFE 120
LHRQRRLQCK ANRLQKQSQQ PRQQPAMLPD PYAVVAMETV YDSTSDMDAD AGLATCLQML 180
CLSSAA
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