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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
LPERR01G17320.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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| Family |
LBD |
| Protein Properties |
Length: 255aa MW: 27201.5 Da PI: 5.844 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G17320.1 | genome | OGE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 118.8 | 3.2e-37 | 41 | 144 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal....peeeredamsslvyeAearardPvyGavgvilklqqqleql 90
aCaaCk++rrkC+++C lapyfpa++p++f+n+h+lFG +n+l+++k++ +e+r+da++s++ye++ar dPv Ga+g+ +kl+ +l++l
LPERR01G17320.1 41 ACAACKHQRRKCTPECELAPYFPADRPARFRNAHRLFGIKNILRIMKKAnalgGQETRDDAATSVIYESDAREADPVFGAAGIARKLSLELNSL 134
7**********************************************9966666788************************************* PP
DUF260 91 kaelallkee 100
+aela+++++
LPERR01G17320.1 135 EAELAAVRSQ 144
******9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MVDGEDGASS SGHSHSSNTG TPQPQPHELQ PAPPPPPPNQ ACAACKHQRR KCTPECELAP 60
YFPADRPARF RNAHRLFGIK NILRIMKKAN ALGGQETRDD AATSVIYESD AREADPVFGA 120
AGIARKLSLE LNSLEAELAA VRSQVESFRR AAAAQQPRPP APTAATALVV PQAGLNLNPI 180
AQAPYFPPPM AAMMLQEQTA ANQVHVAAPD DVHQPVDDYI VEPLDAVDAA TITTAAERHE 240
DDRAPLARAT TEKAP
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