 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR01G08320.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
G2-like |
| Protein Properties |
Length: 498aa MW: 52683.8 Da PI: 6.3783 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR01G08320.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 87.7 | 1.1e-27 | 204 | 258 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH+rFv+aveqL G++kA+P++ilelm++++Lt+++++SHLQkYR++
LPERR01G08320.1 204 KVKVDWTPELHRRFVQAVEQL-GIDKAVPSRILELMGIECLTRHNIASHLQKYRSH 258
5689*****************.********************************86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007165 | Biological Process | signal transduction |
| GO:0009658 | Biological Process | chloroplast organization |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 498 aa
Download sequence Send
to blast |
MLEVSTLRSP KADQHVVGFL PTPPPPTAGV VVNDDDDAFI VDDSLLDYID FTCCDVVPFF 60
HADYVDGDIL PDLEVDPTEL LAEFSSSPED EPPQPASKSP TDEASAGEKK DGVKEDVVAA 120
GDESTAAAHG KKGEEKVDEK NGGGGDEVVS AVTTDDSSAG TGCDGAKSSP SPSAEGHSKR 180
KSSSSSAAAA AAASGKNSHG SKRKVKVDWT PELHRRFVQA VEQLGIDKAV PSRILELMGI 240
ECLTRHNIAS HLQKYRSHRK HLMAREAEAV SWTQKRQMYS TAAVAASVPR KDAPATAAQV 300
TPWPVIPTIG FPPPHAAAAA MAPHPPPFCR PLHPPQLLPV WPRHLAPPPL PAAWAHHQTP 360
MDPASYWQQQ YNAARKWGPQ AVTAATPCIP PPMPPAAMLQ RFPAAPVPGM VPHPMYRPIP 420
PPPLPPHGNK LAALQLQLDA QPSKESIDAA IGDVLVKPWL PLPLGLKPPS LDSVMSELHK 480
QGIPKVPPAA SGGGAAIG
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF318582 | 1e-150 | AF318582.1 Oryza sativa putative transcription factor OsGLK2 (Glk2) mRNA, partial cds. |
| GenBank | AK121019 | 1e-150 | AK121019.1 Oryza sativa Japonica Group cDNA clone:J023049D13, full insert sequence. |
| GenBank | CT834042 | 1e-150 | CT834042.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220E01, full insert sequence. |
| GenBank | CT834044 | 1e-150 | CT834044.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI210C09, full insert sequence. |
