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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
LPERR01G03690.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
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Family |
HD-ZIP |
Protein Properties |
Length: 92aa MW: 10379.7 Da PI: 5.232 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
LPERR01G03690.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 52.8 | 6.8e-17 | 32 | 83 | 3 | 54 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
k+++++ eq ++Le+ F+ ++++ e+++ LA+ lgL+ rqV vWFqNrRa+
LPERR01G03690.1 32 KKRRLSVEQERALERSFKVENKLEPERKAWLARDLGLQPRQVAVWFQNRRAR 83
456899*********************************************8 PP
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2 | HD-ZIP_I/II | 86.9 | 2.7e-28 | 31 | 84 | 1 | 54 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54
ekkrrls eq ++LE+sF+ e+kLeperK+ lar+LglqprqvavWFqnrRAR
LPERR01G03690.1 31 EKKRRLSVEQERALERSFKVENKLEPERKAWLARDLGLQPRQVAVWFQNRRARG 84
69***************************************************6 PP
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF145728 | 2e-96 | AF145728.1 Oryza sativa homeodomain leucine zipper protein (Oshox4) mRNA, complete cds. |
GenBank | AK099710 | 2e-96 | AK099710.1 Oryza sativa Japonica Group cDNA clone:J013077J22, full insert sequence. |
GenBank | AK105484 | 2e-96 | AK105484.1 Oryza sativa Japonica Group cDNA clone:001-127-B05, full insert sequence. |